Anmol Gorakshakar

Selected Projects

Systems biology work with production edges.

A timeline of platforms, models, simulations, and bench-to-computation projects from the plan. The through-line is scientific data work that turns into usable systems.

    1. ProductionScoring Platform

      Scoring Engine

      Built and own the central inference platform delivering every microbiome health score to Viome customers and clinicians, turning internal scientific packages into revenue-critical production infrastructure.

      120Models integrated
      AKSTerraformKEDACircleCI
    2. PublicSide Project

      Overheard

      Fully local macOS meeting recorder, scaffolded and architected by hand with AI writing the bulk of the implementation.

      macOSLocal-firstAudio
    1. SpeedupData Pipeline

      ODM Parquet sync

      Rewrote O(n2) parsing logic to O(n), cutting ODM Parquet sync from 3 days to 8 hours and shrinking a core operational bottleneck.

      3d to 8hsync timeO(n)rewritten complexity
      PerformanceData syncOperational leverage
    2. Internal platformDeveloper Tools

      DASH

      Built the internal developer platform that standardizes scoring release workflows behind compiled Python CLIs, reducing manual release effort and making deploy, rollback, notify, export, and ID translation repeatable.

      1 cmdmake install onboarding4shipped CLI tools
      NuitkaCLISlackRelease workflow
    1. FoundationSystems Biology

      Scoring packages and Score Detail Tool

      Authored the internal Python packages for microbiome score development and built explainability tools that reduced multi-database score audits from 30+ minutes to self-service lookup.

      30m+audit collapsed2core packages
      CLRCPMQuantileStreamlit
    1. Partner platformDrug Discovery

      Historeceptomic

      Led AbbVie-facing drug-discovery platform work, advanced 5+ leads to CRO validation, and rebuilt HR-Algorithm as a 1000x faster Python package integrated into Molsoft ICM.

      1000xalgorithm speedup5+leads to CRO validation
      AbbVieMolsoft ICMFlask API